A transcriptional roadmap to wood formation.
Identifieur interne : 004739 ( Main/Exploration ); précédent : 004738; suivant : 004740A transcriptional roadmap to wood formation.
Auteurs : M. Hertzberg [Suède] ; H. Aspeborg ; J. Schrader ; A. Andersson ; R. Erlandsson ; K. Blomqvist ; R. Bhalerao ; M. Uhlén ; T T Teeri ; J. Lundeberg ; B. Sundberg ; P. Nilsson ; G. SandbergSource :
- Proceedings of the National Academy of Sciences of the United States of America [ 0027-8424 ] ; 2001.
Descripteurs français
- KwdFr :
- Analyse de profil d'expression de gènes (MeSH), Arbres (croissance et développement), Arbres (génétique), Arbres (métabolisme), Bois (MeSH), Cellulose (biosynthèse), Données de séquences moléculaires (MeSH), Gènes de plante (MeSH), Lignine (biosynthèse), Méristème (croissance et développement), Méristème (génétique), Paroi cellulaire (métabolisme), Régulation de l'expression des gènes au cours du développement (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Séquençage par oligonucléotides en batterie (MeSH), Transcription génétique (MeSH), Étiquettes de séquences exprimées (MeSH).
- MESH :
- biosynthèse : Cellulose, Lignine.
- croissance et développement : Arbres, Méristème.
- génétique : Arbres, Méristème.
- métabolisme : Arbres, Paroi cellulaire.
- Analyse de profil d'expression de gènes, Bois, Données de séquences moléculaires, Gènes de plante, Régulation de l'expression des gènes au cours du développement, Régulation de l'expression des gènes végétaux, Séquençage par oligonucléotides en batterie, Transcription génétique, Étiquettes de séquences exprimées.
English descriptors
- KwdEn :
- Cell Wall (metabolism), Cellulose (biosynthesis), Expressed Sequence Tags (MeSH), Gene Expression Profiling (MeSH), Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Lignin (biosynthesis), Meristem (genetics), Meristem (growth & development), Molecular Sequence Data (MeSH), Oligonucleotide Array Sequence Analysis (MeSH), Transcription, Genetic (MeSH), Trees (genetics), Trees (growth & development), Trees (metabolism), Wood (MeSH).
- MESH :
- chemical , biosynthesis : Cellulose, Lignin.
- genetics : Meristem, Trees.
- growth & development : Meristem, Trees.
- metabolism : Cell Wall, Trees.
- Expressed Sequence Tags, Gene Expression Profiling, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Genes, Plant, Molecular Sequence Data, Oligonucleotide Array Sequence Analysis, Transcription, Genetic, Wood.
Abstract
The large vascular meristem of poplar trees with its highly organized secondary xylem enables the boundaries between different developmental zones to be easily distinguished. This property of wood-forming tissues allowed us to determine a unique tissue-specific transcript profile for a well defined developmental gradient. RNA was prepared from different developmental stages of xylogenesis for DNA microarray analysis by using a hybrid aspen unigene set consisting of 2,995 expressed sequence tags. The analysis revealed that the genes encoding lignin and cellulose biosynthetic enzymes, as well as a number of transcription factors and other potential regulators of xylogenesis, are under strict developmental stage-specific transcriptional regulation.
DOI: 10.1073/pnas.261293398
PubMed: 11724959
PubMed Central: PMC64750
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Hertzberg</name><affiliation wicri:level="1"><nlm:affiliation>Umeå Plant Science Center, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Umeå Plant Science Center, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå</wicri:regionArea><wicri:noRegion>901 83 Umeå</wicri:noRegion></affiliation></author><author><name sortKey="Aspeborg, H" sort="Aspeborg, H" uniqKey="Aspeborg H" first="H" last="Aspeborg">H. Aspeborg</name></author><author><name sortKey="Schrader, J" sort="Schrader, J" uniqKey="Schrader J" first="J" last="Schrader">J. Schrader</name></author><author><name sortKey="Andersson, A" sort="Andersson, A" uniqKey="Andersson A" first="A" last="Andersson">A. 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Sandberg</name></author></analytic><series><title level="j">Proceedings of the National Academy of Sciences of the United States of America</title><idno type="ISSN">0027-8424</idno><imprint><date when="2001" type="published">2001</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cell Wall (metabolism)</term><term>Cellulose (biosynthesis)</term><term>Expressed Sequence Tags (MeSH)</term><term>Gene Expression Profiling (MeSH)</term><term>Gene Expression Regulation, Developmental (MeSH)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Genes, Plant (MeSH)</term><term>Lignin (biosynthesis)</term><term>Meristem (genetics)</term><term>Meristem (growth & development)</term><term>Molecular Sequence Data (MeSH)</term><term>Oligonucleotide Array Sequence Analysis (MeSH)</term><term>Transcription, Genetic (MeSH)</term><term>Trees (genetics)</term><term>Trees (growth & development)</term><term>Trees (metabolism)</term><term>Wood (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Analyse de profil d'expression de gènes (MeSH)</term><term>Arbres (croissance et développement)</term><term>Arbres (génétique)</term><term>Arbres (métabolisme)</term><term>Bois (MeSH)</term><term>Cellulose (biosynthèse)</term><term>Données de séquences moléculaires (MeSH)</term><term>Gènes de plante (MeSH)</term><term>Lignine (biosynthèse)</term><term>Méristème (croissance et développement)</term><term>Méristème (génétique)</term><term>Paroi cellulaire (métabolisme)</term><term>Régulation de l'expression des gènes au cours du développement (MeSH)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Séquençage par oligonucléotides en batterie (MeSH)</term><term>Transcription génétique (MeSH)</term><term>Étiquettes de séquences exprimées (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="biosynthesis" xml:lang="en"><term>Cellulose</term><term>Lignin</term></keywords><keywords scheme="MESH" qualifier="biosynthèse" xml:lang="fr"><term>Cellulose</term><term>Lignine</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Arbres</term><term>Méristème</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Meristem</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Meristem</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arbres</term><term>Méristème</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Cell Wall</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Arbres</term><term>Paroi cellulaire</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Expressed Sequence Tags</term><term>Gene Expression Profiling</term><term>Gene Expression Regulation, Developmental</term><term>Gene Expression Regulation, Plant</term><term>Genes, Plant</term><term>Molecular Sequence Data</term><term>Oligonucleotide Array Sequence Analysis</term><term>Transcription, Genetic</term><term>Wood</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de profil d'expression de gènes</term><term>Bois</term><term>Données de séquences moléculaires</term><term>Gènes de plante</term><term>Régulation de l'expression des gènes au cours du développement</term><term>Régulation de l'expression des gènes végétaux</term><term>Séquençage par oligonucléotides en batterie</term><term>Transcription génétique</term><term>Étiquettes de séquences exprimées</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The large vascular meristem of poplar trees with its highly organized secondary xylem enables the boundaries between different developmental zones to be easily distinguished. This property of wood-forming tissues allowed us to determine a unique tissue-specific transcript profile for a well defined developmental gradient. RNA was prepared from different developmental stages of xylogenesis for DNA microarray analysis by using a hybrid aspen unigene set consisting of 2,995 expressed sequence tags. The analysis revealed that the genes encoding lignin and cellulose biosynthetic enzymes, as well as a number of transcription factors and other potential regulators of xylogenesis, are under strict developmental stage-specific transcriptional regulation.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">11724959</PMID><DateCompleted><Year>2002</Year><Month>01</Month><Day>10</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0027-8424</ISSN><JournalIssue CitedMedium="Print"><Volume>98</Volume><Issue>25</Issue><PubDate><Year>2001</Year><Month>Dec</Month><Day>04</Day></PubDate></JournalIssue><Title>Proceedings of the National Academy of Sciences of the United States of America</Title><ISOAbbreviation>Proc Natl Acad Sci U S A</ISOAbbreviation></Journal><ArticleTitle>A transcriptional roadmap to wood formation.</ArticleTitle><Pagination><MedlinePgn>14732-7</MedlinePgn></Pagination><Abstract><AbstractText>The large vascular meristem of poplar trees with its highly organized secondary xylem enables the boundaries between different developmental zones to be easily distinguished. This property of wood-forming tissues allowed us to determine a unique tissue-specific transcript profile for a well defined developmental gradient. RNA was prepared from different developmental stages of xylogenesis for DNA microarray analysis by using a hybrid aspen unigene set consisting of 2,995 expressed sequence tags. The analysis revealed that the genes encoding lignin and cellulose biosynthetic enzymes, as well as a number of transcription factors and other potential regulators of xylogenesis, are under strict developmental stage-specific transcriptional regulation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Hertzberg</LastName><ForeName>M</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Umeå Plant Science Center, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Aspeborg</LastName><ForeName>H</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Schrader</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Andersson</LastName><ForeName>A</ForeName><Initials>A</Initials></Author><Author 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CompleteYN="Y"><DataBank><DataBankName>GENBANK</DataBankName><AccessionNumberList><AccessionNumber>BI784488</AccessionNumber><AccessionNumber>BI784489</AccessionNumber><AccessionNumber>BI784490</AccessionNumber><AccessionNumber>BI784491</AccessionNumber><AccessionNumber>BI784492</AccessionNumber><AccessionNumber>BI784493</AccessionNumber><AccessionNumber>BI784494</AccessionNumber><AccessionNumber>BI784495</AccessionNumber><AccessionNumber>BI784496</AccessionNumber><AccessionNumber>BI784497</AccessionNumber><AccessionNumber>BI784498</AccessionNumber><AccessionNumber>BI784499</AccessionNumber><AccessionNumber>BI784500</AccessionNumber><AccessionNumber>BI784501</AccessionNumber><AccessionNumber>BI784502</AccessionNumber><AccessionNumber>BI784503</AccessionNumber><AccessionNumber>BI784504</AccessionNumber><AccessionNumber>BI784505</AccessionNumber><AccessionNumber>BI784506</AccessionNumber><AccessionNumber>BI784507</AccessionNumber><AccessionNumber>BI784508</AccessionNumber><AccessionNumber>BI784509</AccessionNumber><AccessionNumber>BI784510</AccessionNumber><AccessionNumber>BI784511</AccessionNumber><AccessionNumber>BI784512</AccessionNumber><AccessionNumber>BI784513</AccessionNumber><AccessionNumber>BI784514</AccessionNumber><AccessionNumber>BI784515</AccessionNumber></AccessionNumberList></DataBank></DataBankList><PublicationTypeList><PublicationType 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MajorTopicYN="N">Cellulose</DescriptorName><QualifierName UI="Q000096" MajorTopicYN="N">biosynthesis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020224" MajorTopicYN="N">Expressed Sequence Tags</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020869" MajorTopicYN="N">Gene Expression Profiling</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018507" MajorTopicYN="N">Gene Expression Regulation, Developmental</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008031" MajorTopicYN="N">Lignin</DescriptorName><QualifierName UI="Q000096" MajorTopicYN="N">biosynthesis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018519" MajorTopicYN="N">Meristem</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020411" MajorTopicYN="N">Oligonucleotide Array Sequence Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014158" MajorTopicYN="N">Transcription, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014934" MajorTopicYN="Y">Wood</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate 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Andersson</name><name sortKey="Aspeborg, H" sort="Aspeborg, H" uniqKey="Aspeborg H" first="H" last="Aspeborg">H. Aspeborg</name><name sortKey="Bhalerao, R" sort="Bhalerao, R" uniqKey="Bhalerao R" first="R" last="Bhalerao">R. Bhalerao</name><name sortKey="Blomqvist, K" sort="Blomqvist, K" uniqKey="Blomqvist K" first="K" last="Blomqvist">K. Blomqvist</name><name sortKey="Erlandsson, R" sort="Erlandsson, R" uniqKey="Erlandsson R" first="R" last="Erlandsson">R. Erlandsson</name><name sortKey="Lundeberg, J" sort="Lundeberg, J" uniqKey="Lundeberg J" first="J" last="Lundeberg">J. Lundeberg</name><name sortKey="Nilsson, P" sort="Nilsson, P" uniqKey="Nilsson P" first="P" last="Nilsson">P. Nilsson</name><name sortKey="Sandberg, G" sort="Sandberg, G" uniqKey="Sandberg G" first="G" last="Sandberg">G. Sandberg</name><name sortKey="Schrader, J" sort="Schrader, J" uniqKey="Schrader J" first="J" last="Schrader">J. Schrader</name><name sortKey="Sundberg, B" sort="Sundberg, B" uniqKey="Sundberg B" first="B" last="Sundberg">B. Sundberg</name><name sortKey="Teeri, T T" sort="Teeri, T T" uniqKey="Teeri T" first="T T" last="Teeri">T T Teeri</name><name sortKey="Uhlen, M" sort="Uhlen, M" uniqKey="Uhlen M" first="M" last="Uhlén">M. Uhlén</name></noCountry><country name="Suède"><noRegion><name sortKey="Hertzberg, M" sort="Hertzberg, M" uniqKey="Hertzberg M" first="M" last="Hertzberg">M. Hertzberg</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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